![]() |
|||||
|
Liste des publications
|
Publications summary |
Publication list
|
Authors of peer-reviewed publications are indicated in red
Publications in the domain of Philosophy, History of Sciences and Ethics
A Danchin
A brief history of genome research and bioinformatics in France
Bioinformatics (2000) 16: 65-75
A
Danchin
L'identité génétique
Quatrième
conférence de l'Université de tous les savoirs, cycle: Qu'est-ce que
la vie?
coordonné par Yves Michaud, Odile Jacob (2000) 1: 59-68
A
Danchin
Etapes et devenir de la révolution génomique
Regards mai 2000
![]() |
A Danchin |
The natural war [book review: The Biology of Doom by Ed Regis] | |
EMBO Reports (2000) 1: 216 ![]() |
![]() |
A Danchin |
Zi ran yu ren wei (en Chinois) (![]() |
|
Ke xue yu ren wen, Transcultural Dialogue (2000), Yue Daiyun, 樂 黛雲 (乐 黛云) ed., Beijing University Press 5: 1-9 |
![]() |
A Danchin |
![]() In: Yin te wang chuang xin ji tou zi - lai zi hua er jie he gui gu de bao gao |
|
published by the Chinese Association for
Science and Business (![]() |
![]() |
A Danchin, A Sekowska |
Expression profiling in reference bacteria: dreams and reality | |
Genome Biol (2000) 1:
REVIEWS1024 doi:
10.1186/gb-2000-1-4-reviews1024 ![]() |
A Danchin, P
Guerdoux-Jamet, I Moszer, P Nitschké
Mapping
the bacterial cell architecture into the chromosome
Philos Trans R Soc Lond B Biol Sci (2000) 355:
179-190 doi: 10.1098/rstb.2000.0557.
V Norris, J Fralick,
A Danchin
A SeqA hyperstructure and its interactions direct the replication and
sequestration of DNA
Mol Microbiol (2000) 37: 696-702
doi: 10.1046/j.1365-2958.2000.02019.x
EPC Rocha, A
Sekowska, A Danchin
Sulphur islands in the Escherichia coli genome: markers of the
cell's architecture?
FEBS Lett (2000) 476: 8-11 doi:
10.1016/s0014-5793(00)01660-4
EPC Rocha, P
Guerdoux-Jamet, I Moszer, A Viari, A Danchin
Implication of gene distribution in the bacterial chromosome for the
bacterial cell factory
J Biotechnol (2000) 78: 209-219 doi:
10.1016/s0168-1656(00)00197-8
A Sekowska, A
Danchin, JL Risler
Phylogeny of related functions: the case of polyamine biosynthetic
enzymes
Microbiology (2000) 146: 1815-1828 doi:
10.1099/00221287-146-8-1815
A Sekowska, JY
Coppée, JP Le Caer, I Martin-Verstraete, A Danchin
S-adenosylmethionine decarboxylase of Bacillus subtilis is
closely related to archaebacterial counterparts
Mol Microbiol (2000) 36: 1135-1147 doi:
10.1046/j.1365-2958.2000.01930.x
![]() |
A Sekowska, HF Kung, A Danchin |
Sulfur metabolism in Escherichia coli and related bacteria: facts and fiction | |
J Mol Microbiol Biotechnol (2000) 2: 145-177 |
C Tendeng, C Badaut,
E Krin, P Gounon, S Ngo, A Danchin, S Rimsky, P Bertin
Isolation and characterization of vicH, encoding a new
pleiotropic regulator in Vibrio cholerae
J Bacteriol (2000) 182: 2026-2032 doi:
10.1128/JB.182.7.2026-2032.2000
![]() |
Back to top |
P Bertin, F Hommais,
E Krin, O Soutourina, C Tendeng, S Derzelle, A Danchin
H-NS and H-NS-like proteins in Gram-negative bacteria and their multiple
role in the regulation of bacterial metabolism
Biochimie (2001) 83: 235-241 doi:
10.1016/s0300-9084(01)01247-0
JY Coppée, S Auger,
E Turlin, A Sekowska, JP Le Caer, V Labas, V Vagner, A Danchin, I
Martin-Verstraete
Sulfur-limitation-regulated proteins in Bacillus subtilis: a
two-dimensional gel electrophoresis study
Microbiology (2001) 147: 1631-1640 doi:
10.1099/00221287-147-6-1631
![]() |
![]() |
Nature et artifice [Nature and Artifice] | |
Alliage (2001) 45-46: 125-133 |
A
Danchin
II modi di produzione del sapere: esiste une specificità occidentale?
In " Tecnocrazia "
Keiron (2001) 9: 52-62
A Danchin
Bacillus subtilis
In: “Encyclopedia of Genetics”, Academic Press, New York (2001): 135-144
A Danchin
Bacillus subtilis
Biotechnology Volume 5b: Genome Projects of Model Organisms (HJ Rehm, G
Reed, A Puehler, C Sensen, editors), Wiley-VCH (2001) 12-16
MF Hullo, I Moszer,
A Danchin, I Martin-Verstraete
CotA of Bacillus subtilis is a copper-dependent laccase
J Bacteriol (2001) 183:
5426-5430 doi:
10.1128/JB.183.18.5426-5430.2001
MF Hullo, A Sekowska, E Presecan-Siedel, JY Coppée, I
Martin-Verstraete, P Glaser & A Danchin
Screening for growth and lacZ reporter gene induction with metal
ions and chelators, amino-acid analogs, antibiotics, inhibitors of
oxidative phosphorylation and miscellaneous stress factors
In: " Functional Analysis of Bacterial Genes, A Practical Manual " (W
Schumann, SD Ehrlich, N Ogasawara eds), J Wiley & Sons, Ltd (2001) 9B:
87-93
E Krin, F Hommais, O Soutourina, S Ngo, A
Danchin, P Bertin
Description and application of a rapid method for genomic DNA direct
sequencing
FEMS Microbiol Lett (2001) 199: 229-233 doi:
10.1111/j.1574-6968.2001.tb10679.x
I Moszer & A Danchin
List of Bacillus subtilis unknown genes of known function
In: " Functional Analysis of Bacterial Genes, A Practical Manual " (W
Schumann, S D Ehrlich, N Ogasawara eds), J Wiley & Sons, Ltd (2001)
30: 293-326
EPC Rocha, I Moszer, M Klaerr-Blanchard, A Sekowska, C Médigue, A
Viari & A Danchin
In silico Genome Analysis
In: " Functional Analysis of Bacterial Genes, A Practical Manual " (W
Schumann, S D Ehrlich, N Ogasawara eds), J Wiley & Sons, Ltd (2001)
2: 5-19
![]() |
A Sekowska, L
Mulard, S Krogh, JK Tse, A Danchin MtnK, methylthioribose kinase, is a starvation-induced protein in Bacillus subtilis BMC Microbiol (2001) 1: 15 doi: 10.1186/1471-2180-1-15 ![]() |
E Turlin, M
Perrotte-Piquemal, A Danchin, F Biville
Regulation of the early steps of 3-phenylpropionate catabolism
in Escherichia coli
J Mol Microbiol Biotechnol (2001) 3: 127-133
![]() |
Back to top |
|
|
F Hommais, C
Laurent-Winter, V Labas, E Krin, C Tendeng, O Soutourina, A Danchin, P
Bertin
Effect of mild acid pH on the functioning of bacterial membranes
in Vibrio cholerae
Proteomics (2002) 2: 571-579 doi:
10.1002/1615-9861(200205)2:5<571::AID-PROT571>3.0.CO;2-G
E Krin, O Sismeiro,
A Danchin, PN Bertin
The regulation of Enzyme IIA(Glc) expression controls adenylate
cyclase activity in Escherichia coli
Microbiology (2002) 148: 1553-1559 doi:
10.1099/00221287-148-5-1553
OA Soutourina, E
Krin, C Laurent-Winter, F Hommais, A Danchin, PN Bertin
Regulation of bacterial motility in response to low pH in Escherichia
coli: the role of H-NS protein
Microbiology (2002) 148: 1543-1551 doi:
10.1099/00221287-148-5-1543
![]() |
Back to top |
![]() |
A Danchin |
The Delphic Boat. What genomes tell us, Harvard University Press (2003) | |
[comment in EMBO
Reports, comment in Nature
Genetics, comment in Nature ![]() ![]() ![]() |
|
|
F Biville, T Oshima,
H Mori, Y Kawagoe, O Bouvet, MN Rager, M Perrotte-Piquemal, A Danchin
Escherichia coli response to exogenous pyrophosphate and
analogs
J Mol Microbiol Biotechnol (2003) 5: 37-45 doi:
10.1159/000068722
![]() |
A Danchin |
Genomes and evolution | |
Curr Issues Mol Biol (2003) 5: 37-42 |
|
|
A
Danchin
Une nouvelle grippe pourrait faire des ravages dans le monde entier
La Recherche (2003) 365: 45
![]() |
Back to top |
P Burguière, S
Auger, MF Hullo, A Danchin, I Martin-Verstraete
Three different systems participate in L-cystine uptake in Bacillus
subtilis
J Bacteriol (2004) 186: 4875-4884 doi:
10.1128/JB.186.15.4875-4884.2004
![]() |
A Danchin |
The animal in the machine: is there a geometric program in the genetic program? | |
Proceedings of the Deuxièmes Entretiens de Bures (E Westhof, N Hardy, eds) World Scientific (2004) pp 375-399 |
A Danchin, S Noria |
![]() |
Genome structures, operating systems and the
image of the machine
|
|
In: Molecules
in time and space. Bacterial shape, division and phylogeny
(M Vicente, J Tamames, A Valencia, J Mingorance, eds) Kluver
(2004) pp 195-208 ![]() |
S Derzelle, S Ngo, E
Turlin, E Duchaud, A Namane, F Kunst, A Danchin, P Bertin, JF Charles
AstR-AstS, a new two-component signal transduction system,
mediates swarming, adaptation to stationary phase and phenotypic
variation in Photorhabdus luminescens
Microbiology (2004) 150: 897-910 doi:
10.1099/mic.0.26563-0
S Derzelle, E
Turlin, E Duchaud, S Pages, F Kunst, A Givaudan, A Danchin
The PhoP-PhoQ two-component regulatory system of Photorhabdus
luminescens is essential for virulence in insects
J Bacteriol (2004) 186: 1270-1279 doi:
10.1128/JB.186.5.1270-1279.2004.
MF Hullo, S Auger, E
Dassa, A Danchin, I Martin-Verstraete
The metNPQ operon of Bacillus subtilis encodes
an ABC permease transporting methionine sulfoxide, D- and L-methionine
Res Microbiol (2004) 155: 80-86 doi:
10.1016/j.resmic.2003.11.008
![]() |
Back to top |
|
![]() |
H
Ashida, A Danchin, A Yokota |
A Danchin
Genome diversity: A grammar of microbial genomes
ComPlexUs (2004/2005) 2: 61-70
![]() |
![]() |
A Pühler, D Jording, J Kalinowski, D Buttgereit, R Renkawitz-Pohl, L
Altschmied, A Danchin, A Sekowska, H Feldmann, HP Klenk, M Kröger
Genome projects on model organisms
Handbook of Genome Research, Genomics, Proteomics, Metabolomics,
Bioinformatics, Ethical and Legal Issues, CW Sensen ed
Wiley-VCH (2005) 1: 3-43
|
|
|
E Turlin, O Sismeiro, JP Le Caer, V
Labas, A Danchin, F Biville 3-phenylpropionate catabolism and the Escherichia coli oxidative stress response Res Microbiol (2005) 156: 312-321 doi: 10.1016/j.resmic.2004.10.012 |
![]() |
G Pascal, C Médigue, A Danchin |
Universal biases in protein composition of model prokaryotes | |
Proteins (2005) 60: 27-35
![]() |
|
|
|
G
Fang, EPC Rocha, A Danchin |
![]() |
![]() |
P Burguière, J Fert, I Guillouard, S Auger S, A
Danchin, I Martin-Verstraete
Regulation of the Bacillus subtilis ytmI operon, involved in
sulfur metabolism.
J Bacteriol (2005) 187: 6019-6030 doi:
10.1128/JB.187.17.6019-6030.2005
![]() |
E Larsabal, A Danchin |
Genomes are covered with ubiquitous 11bp periodic patterns, the "class A flexible patterns" | |
BMC Bioinformatics (2005) 6: 206
doi: 10.1186/1471-2105-6-206 ![]() |
|
|